miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|21377206|gb|BQ518337.1|BQ518337 GGCAAAGCGAAAAGAAGAATCAGCAGAAAGAAGGAGAAGAAATCTGCCAAAGAAGGCCTTGAGGCAACGGAAAAAGGAGA
GACAAATATTGGAGCTGAAGGAGGCAGCAATCCTGTTGTTACAGTCCTGGATATCTTCAAGCTTCATCAGACCCTACGGG
CTGGAAAGAAGATCTCCTCAATTTCTTTCTCCCCACTTACTTCAAAGAATTCACTGGCTACCTTAGCTTTGTCTTTGAAT
AATAATTTATTGGAATTTCATGCAATAGAAAGCAATTCAACTAGTAAATTGAGTGCTATTGAGCTTCAGGGGCATCGTGC
TGATGTCAGAAGTGTAACTCTCAGCTCAGATAACACTCTTTTGATGTCAACTAGTCACAGTGCAATTAAAATATGGAACC
CTACTACTGGTTCTTGCCTTCGCACAATTGATTCAGGATATGGTCTTTGTGGACTCTTTGTTCCAGGCAACAAGTATGCT
GTTGTTGGTACAAAGGGTGGGACCCTGGAATTTATTGACGTTAGAAGTGGTACTTGTGTGGAAGTAGTGGAAGCCCATGG
TGGATCTGTTCAGTCAATTGCTCTAACTCCAGATGGGACAGGGTTTCTAACTGGCAGTGCCGACCACGACATTAAATTCT
GGGAATTTCAAATGGTGCAGAAGTCTGGTGAAGGGGTCTAGCATTTACTGCATCTCC




Most similar to sp|Q8BHB4|WDR3_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8BHB4|WDR3_MOUSE WD repeat_field-containing protein 3 OS=Mus musculus
           GN=Wdr3 PE=2 SV=1
          Length = 942

 Score =  132 bits (333), Expect = 2e-30
 Identities = 58/124 (46%), Positives = 88/124 (70%)
 Frame = +1

Query: 286 KLSAIELQGHRADVRSVTLSSDNTLLMSTSHSAIKIWNPTTGSCLRTIDSGYGLCGLFVP 465
           + S I + GHR+DVR+++ SSDN  ++S +  +IKIWN +T  C+RT+   Y LC  FVP
Sbjct: 404 RTSRITIGGHRSDVRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRTMPCEYALCSFFVP 463

Query: 466 GNKYAVVGTKGGTLEFIDVRSGTCVEVVEAHGGSVQSIALTPDGTGFLTGSADHDIKFWE 645
           G++  V+GTK G L+  D+ SGT +E + AH G++ S++L+PD  GF+TG AD  +KFW+
Sbjct: 464 GDRQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWD 523

Query: 646 FQMV 657
           F++V
Sbjct: 524 FELV 527